WebCRYSTALP2: sequence-based protein crystallization propensity prediction. Kurgan L1, Razib AA, Aghakhani S, Dick S, Mizianty M, Jahandideh S. Posted on 2024/03/10 2024/03/10 Categories Protein Sequence Analysis Tags Crystallization , CRYSTALP2 , Propensity , Protein , Sequence WebAug 7, 2012 · However it is worth to be mentioned that MetaPPCP is a meta-predictor and it is developed based on different kind of features generated by OB-Score, ParCrys, XtalPred, and CRYSTALP2 predictors like number of homologs in PDB, Gravy hydropathy index, and isoelectric point values. 3.2. Prediction performance of RF method using second database
mp-7577: CoSi (cubic, P2_13, 198)
WebJul 31, 2009 · CRYSTALP2 provides relatively accurate crystallization propensity predictions for a given protein chain that either outperform or complement the existing approaches. … WebCrystal System Space Group Crystal Class # Crystal Class Mineral Triclinic P1 1 Pedial kaolinite Triclinic P1 1 Pedial amesite Triclinic P1 1 Pedial Analcime fix internet issues in windows
CRYSTALP2: sequence-based protein crystallization …
WebJul 31, 2009 · CRYSTALP2 extends its predecessor, CRYSTALP, by enabling predictions for sequences of unrestricted size and provides improved prediction quality. Results A significant majority of the collocations used by CRYSTALP2 include residues with high conformational entropy, or low entropy and high potential to mediate crystal contacts; … WebMar 10, 2024 · CRYSTALP2 – Sequence-based Protein Crystallization Propensity prediction CRYSTALP2 :: DESCRIPTION CRYSTALP2 is designed for in-silico prediction of protein … WebSupporting: 4, Mentioning: 68 - Background: Current protocols yield crystals for <30% of known proteins, indicating that automatically identifying crystallizable proteins may improve high-throughput structural genomics efforts. We introduce CRYSTALP2, a kernel-based method that predicts the propensity of a given protein sequence to produce diffraction … cannabis boston